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Journal Article (163)

2021
Journal Article
Ingman, T.; Eisenmann, S.; Skourtanioti, E.; Akar, M.; Ilgner, J.; Gnecchi Ruscone, G. A.; le Roux, P.; Shafiq, R.; Neumann, G. U.; Keller, M. et al.; Freund, C.; Marzo, S.; Lucas, M.; Krause, J.; Roberts, P.; Yener, K. A.; Stockhammer, P. W.: Human mobility at Tell Atchana (Alalakh), Hatay, Turkey during the 2nd millennium BC: integration of isotopic and genomic evidence. PLoS One 16 (6), 0241883, p. e0241883 (2021)
Journal Article
Fellows Yates, J. A.; Velsko, I. M.; Aron, F.; Posth, C.; Hofman, C. A.; Austin, R. M.; Parker, C. E.; Mann, A. E.; Nägele, K.; Arthur, K. W. et al.; Arthur, J. W.; Bauer, C. C.; Crevecoeur, I.; Cupillard, C.; Curtis, M. C.; Dalén, L.; Díaz-Zorita Bonilla, M.; Fernández-Lomana, D.; Carlos, J.; Drucker, D. G.; Escribano Escrivá, E.; Francken, M.; Gibbon, V. E.; Morales, G.; R., M.; Grande Mateu, A.; Harvati, K.; Henry, A. G.; Humphrey, L.; Menéndez, M.; Mihailović, D.; Peresani, M.; Rodríguez Moroder, S.; Roksandic, M.; Rougier, H.; Sázelová, S.; Stock, J. T.; Straus, L. G.; Svoboda, J.; Teßmann, B.; Walker, M. J.; Power, R. C.; Lewis, C. M.; Sankaranarayanan, K.; Guschanski, K.; Wrangham, R. W.; Dewhirst, F. E.; Salazar-García, D. C.; Krause, J.; Herbig, A.; Warinner, C.: The evolution and changing ecology of the African hominid oral microbiome. Proceedings of the National Academy of Sciences of the United States of America 118 (20), e2021655118, pp. 1 - 11 (2021)
Journal Article
Prüfer, K.; Posth, C.; Yu, H.; Stoessel, A.; Spyrou, M. A.; Deviese, T.; Mattonai, M.; Ribechini, E.; Higham, T.; Velemínský, P. et al.; Brůžek, J.; Krause, J.: A genome sequence from a modern human skull over 45,000 years old from Zlatý kůň in Czechia. Nature Ecology & Evolution, s41559-021-01443-x (2021)
Journal Article
Gnecchi-Ruscone, G. A.; Khussainova, E.; Kahbatkyzy, N.; Musralina, L.; Spyrou, M. A.; Bianco, R. A.; Radzeviciute, R.; Martins, N. F. G.; Freund, C.; Iksan, O. et al.; Garshin, A.; Zhaniyazov, Z.; Bekmanov, B.; Kitov, E.; Samashev, Z.; Beisenov, A.; Berezina, N.; Berezin, Y.; Bíró, A. Z.; Évinger, S.; Bissembaev, A.; Akhatov, G.; Mamedov, A.; Onggaruly, A.; Voyakin, D.; Chotbayev, A.; Kariyev, Y.; Buzhilova, A.; Djansugurova, L.; Jeong, C.; Krause, J.: Ancient genomic time transect from the Central Asian Steppe unravels the history of the Scythians. Science Advances 7 (13), eabe4414 (2021)
Journal Article
Wang, C.-C.; Yeh, H.-Y.; Popov, A. N.; Zhang, H.-Q.; Matsumura, H.; Sirak, K.; Cheronet, O.; Kovalev, A.; Rohland, N.; Kim, A. M. et al.; Mallick, S.; Bernardos, R.; Tumen, D.; Zhao, J.; Liu, Y.-C.; Liu, J.-Y.; Mah, M.; Wang, K.; Zhang, Z.; Adamski, N.; Broomandkhoshbacht, N.; Callan, K.; Candilio, F.; Carlson, K. S. D.; Culleton, B. J.; Eccles, L.; Freilich, S.; Keating, D.; Lawson, A. M.; Mandl, K.; Michel, M.; Oppenheimer, J.; Özdoğan, K. T.; Stewardson, K.; Wen, S.; Yan, S.; Zalzala, F.; Chuang, R.; Huang, C.-J.; Looh, H.; Shiung, C.-C.; Nikitin, Y. G.; Tabarev, A. V.; Tishkin, A. A.; Lin, S.; Sun, Z.-Y.; Wu, X.-M.; Yang, T.-L.; Hu, X.; Chen, L.; Du, H.; Bayarsaikhan, J.; Mijiddorj, E.; Erdenebaatar, D.; Iderkhangai, T.-O.; Myagmar, E.; Kanzawa-Kiriyama, H.; Nishino, M.; Shinoda, K.-i.; Shubina, O. A.; Guo, J.; Cai, W.; Deng, Q.; Kang, L.; Li, D.; Li, D.; Lin, R.; Nini; Shrestha, R.; Wang, L.-X.; Wei, L.; Xie, G.; Yao, H.; Zhang, M.; He, G.; Yang, X.; Hu, R.; Robbeets, M.; Schiffels, S.; Kennett, D. J.; Jin, L.; Li, H.; Krause, J.; Pinhasi, R.; Reich, D.: Genomic Insights into the Formation of Human Populations in East Asia. Nature, s41586-021-03336-2 (2021)
Journal Article
Orlando, L.; Allaby, R.; Skoglund, P.; Sarkissian, C. D.; Stockhammer, P. W.; Ávila-Arcos, M. C.; Fu, Q.; Krause, J.; Willerslev, E.; Stone, A. C. et al.; Warinner, C. G.: Ancient DNA analysis. Nature reviews: Methods primers 1 (14), s43586-020-00011-0 (2021)
Journal Article
Immel, A.; Pierini, F.; Rinne, C.; Meadows, J.; Barquera, R.; Szolek, A.; Susat, J.; Böhme, L.; Dose, J.; Bonczarowska, J. et al.; Drummer, C.; Fuchs, K.; Ellinghaus, D.; Kässens, J. C.; Furholt, M.; Kohlbacher, O.; Schade-Lindig, S.; Franke, A.; Schreiber, S.; Krause, J.; Müller, J.; Lenz, T. L.; Nebel, A.; Krause-Kyora, B.: Genome-wide study of a Neolithic Wartberg grave community reveals distinct HLA variation and hunter-gatherer ancestry. Communications Biology 4 (1), 113 (2021)
2020
Journal Article
Furtwängler, A.; Neukamm, J.; Böhme, L.; Reiter, E.; Vollstedt, M.; Arora, N.; Singh, P.; Cole, S. T.; Knauf, S.; Calvignac-Spencer, S. et al.; Krause-Kyora, B.; Krause, J.; Schuenemann, V. J.; Herbig, A.: Comparison of target enrichment strategies for ancient pathogen DNA. Biotechniques 69 (6), pp. 455 - 459 (2020)
Journal Article
McDonald, S. K.; Matisoo-Smith, E. A.; Buckley, H. R.; Walter, R. K.; Aung, H. L.; Collins, C. J.; Cook, G. M.; Kardailsky, O.; Krause, J.; Knapp, M.: 'TB or not TB': the conundrum of pre-European contact tuberculosis in the Pacific. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 375 (1812), 20190583 (2020)
Journal Article
Jeong, C.; Wang, K.; Wilkin, S.; Taylor, W. T. T.; Miller, B. K.; Bemmann, J. H.; Stahl, R.; Chiovelli, C.; Knolle, F.; Ulziibayar, S. et al.; Khatanbaatar, D.; Erdenebaatar, D.; Erdenebat, U.; Ochir, A.; Ankhsanaa, G.; Vanchigdash, C.; Ochir, B.; Munkhbayar, C.; Tumen, D.; Kovalev, A.; Kradin, N.; Bazarov, B. A.; Miyagashev, D. A.; Konovalov, P. B.; Zhambaltarova, E.; Ventresca Miller, A. R.; Haak, W.; Schiffels, S.; Krause, J.; Boivin, N. L.; Erdene, M.; Hendy, J.; Warinner, C. G.: A dynamic 6,000-year genetic history of Eurasia’s eastern steppe. Cell 183 (4), pp. 890 - 904.e29 (2020)
Journal Article
Parker, E. C.; Rohrlach, A. B.; Friederich, S.; Nagel, S.; Meyer, M.; Krause, J.; Bos, K. I.; Haak, W.: A systematic investigation of human DNA preservation in medieval skeletons. Scientific Reports 10 (1), 18225 (2020)
Journal Article
Forth, J. H.; Forth, L. F.; Lycett, S.; Bell-Sakyi, L.; Keil, G. M.; Blome, S.; Calvignac-Spencer, S.; Wissgott, A.; Krause, J.; Höper, D. et al.; Kampen, H.; Beer, M.: Identification of African swine fever virus-like elements in the soft tick genome provides insights into the virus’ evolution. BMC Biology 18 (1), 136 (2020)
Journal Article
Siebke, I.; Furtwängler, A.; Steuri, N.; Hafner, A.; Ramstein, M.; Krause, J.; Lösch, S.: Crops vs. animals: regional differences in subsistence strategies of Swiss Neolithic farmers revealed by stable isotopes. Archaeological and Anthropological Sciences 12 (10), 235, pp. 1 - 30 (2020)
Journal Article
Barquera, R.; Hernández-Zaragoza, D. I.; Bravo-Acevedo, A.; Arrieta-Bolaños, E.; Clayton, S.; Acuña-Alonzo, V.; Martínez-Álvarez, J. C.; López-Gil, C.; Adalid-Sáinz, C.; Vega-Martínez, M. d. R. et al.; Escobedo-Ruíz, A.; Juárez-Cortés, E. D.; Immel, A.; Pacheco-Ubaldo, H.; González-Medina, L.; Lona-Sánchez, A.; Lara-Riegos, J.; Sánchez-Fernández, M. G. d. J.; Díaz-López, R.; Guizar-López, G. U.; Medina-Escobedo, C. E.; Arrazola-García, M. A.; Montiel-Hernández, G. D.; Hernández-Hernández, O.; la Cruz, R.-d.; Rocío, F. d.; Juárez-Nicolás, F.; Pantoja-Torres, J. A.; Rodríguez-Munguía, T. J.; Juárez-Barreto, V.; Delgado-Aguirre, H.; Escutia-González, A. B.; Goné-Vázquez, I.; Benítez-Arvizu, G.; Arellano-Prado, F. P.; García-Arias, V. E.; Rodríguez-López, M. E.; Méndez-Mani, P.; García-Álvarez, R.; González-Martínez, M. d. R.; Aquino-Rubio, G.; Escareño-Montiel, N.; Vázquez-Castillo, T. V.; Uribe-Duarte, M. G.; Ruíz-Corral, M. d. J.; Ortega-Yáñez, A.; Bernal-Felipe, N.; Gómez-Navarro, B.; Arriaga-Perea, A. J.; Martínez-Bezies, V.; Macías-Medrano, R. M.; Aguilar-Campos, J. A.; Solís-Martínez, R.; Serrano-Osuna, R.; Sandoval-Sandoval, M. J.; Jaramillo-Rodríguez, Y.; Salgado-Adame, A.; Juárez-de la Cruz, F.; Novelo-Garza, B.; Pavón-Vargas, M. d. l. Á.; Salgado-Galicia, N.; Bortolini, M. C.; Gallo, C.; Bedoya, G.; Rothhammer, F.; González-José, R.; Ruiz-Linares, A.; Canizales-Quinteros, S.; Romero-Hidalgo, S.; Krause, J.; Zúñiga, J.; Yunis, E. J.; Bekker-Méndez, C.; Granados, J.: The immunogenetic diversity of the HLA system in Mexico correlates with underlying population genetic structure. Human Immunology 81 (9), 2020.06.008, pp. 461 - 474 (2020)
Journal Article
Neukamm, J.; Pfrengle, S.; Molak, M.; Seitz, A.; Francken, M.; Eppenberger, P.; Avanzi, C.; Reiter, E.; Urban, C.; Welte, B. et al.; Stockhammer, P. W.; Teßmann, B.; Herbig, A.; Harvati, K.; Nieselt, K.; Krause, J.; Schuenemann, V. J.: 2000-year-old pathogen genomes reconstructed from metagenomic analysis of Egyptian mummified individuals. BMC Biology 18 (1), 108 (2020)
Journal Article
Majander, K.; Pfrengle, S.; Kocher, A.; Neukamm, J.; du Plessis, L.; Pla-Díaz, M.; Arora, N.; Akgül, G.; Salo, K.; Schats, R. et al.; Inskip, S.; Oinonen, M.; Valk, H.; Malve, M.; Kriiska, A.; Onkamo, P.; González-Candelas, F.; Kühnert, D.; Krause, J.; Schuenemann, V. J.: Ancient bacterial genomes reveal a high diversity of Treponema pallidum Strains in early Modern Europe. Current Biology 30 (19), 2020.07.058, pp. 3788 - 3803.e10 (2020)
Journal Article
Barquera, R.; Krause, J.: An ancient view on host pathogen interaction across time and space. Current Opinion in Immunology 65, pp. 65 - 69 (2020)
Journal Article
Nägele, K.; Posth, C.; Iraeta Orbegozo, M.; Chinique de Armas, Y.; Godoy, H.; Teresita, S.; Herrera, G.; M., U.; Nieves-Colón, M. A.; Sandoval-Velasco, M. et al.; Mylopotamitaki, D.; Radzeviciute, R.; Laffoon, J.; Pestle, W. J.; Ramos-Madrigal, J.; Lamnidis, T. C.; Schaffer, W. C.; Carr, R. S.; Day, J. S.; Arredondo Antúnez, C.; Rangel Rivero, A.; Martínez-Fuentes, A. J.; Crespo-Torres, E.; Roksandic, I.; Stone, A. C.; Lalueza-Fox, C.; Hoogland, M.; Roksandic, M.; Hofman, C. L.; Krause, J.; Schroeder, H.: Genomic insights into the early peopling of the Caribbean. Science 369 (6502), eaba8697, pp. 456 - 460 (2020)
Journal Article
Wang, K.; Goldstein, S. T.; Bleasdale, M.; Clist, B.; Bostoen, K.; Bakwa-Lufu, P.; Buck, L. T.; Crowther, A.; Dème, A.; McIntosh, R. J. et al.; Mercader, J.; Ogola, C.; Power, R. C.; Sawchuk, E. A.; Robertshaw, P.; Wilmsen, E. N.; Petraglia, M. D.; Ndiema, E.; Manthi, F. K.; Krause, J.; Roberts, P.; Boivin, N. L.; Schiffels, S.: Ancient genomes reveal complex patterns of population movement, interaction, and replacement in sub-Saharan Africa. Science Advances 6 (24), eaaz0183 (2020)
Journal Article
Yu, H.; Spyrou, M. A.; Karapetian, M.; Shnaider, S.; Radzeviciute, R.; Nägele, K.; Neumann, G. U.; Penske, S. E.; Zech, J.; Lucas, M. et al.; LeRoux, P.; Roberts, P.; Pavlenok, G.; Buzhilova, A.; Posth, C.; Jeong, C.; Krause, J.: Paleolithic to Bronze Age Siberians reveal connections with first Americans and across Eurasia. Cell 181 (6), 2020.04.037, pp. 1232 - 1245.e20 (2020)
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