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Fellows Yates, J. A.; Andrades Valtueña, A.; Vågene, A. J.; Cribdon, B.; Velsko, I. M.; Borry, M.; Bravo-López, M. J.; Fernandez-Guerra, A.; Green, E. J.; Ramachandran, S. L. et al.; Heintzman, P. D.; Spyrou, M. A.; Hübner, A.; Gancz, A. S.; Hider, J.; Allshouse, A. F.; Warinner, C.: Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir. Scientific Data 8 (1), 31, pp. 1 - 8 (2021)

Mann, A. E.; Fellows Yates, J. A.; Fagernäs, Z.; Austin, R. M.; Nelson, E. A.; Hofman, C. A.: Do I have something in my teeth? The trouble with genetic analyses of diet from archaeological dental calculus. Quaternary International (2020)

Velsko, I. M.; Fellows Yates, J. A.; Aron, F.; Hagan, R.; Frantz, L. A. F.; Loe, L.; Martinez, J. B. R.; Chaves, E.; Gosden, C.; Larson, G. et al.; Warinner, C. G.: Microbial differences between dental plaque and historic dental calculus are related to oral biofilm maturation stage. Microbiome 7 (1), 102 (2019)

Swift, J. A.; Bunce, M.; Dortch, J.; Douglass, K.; Faith, J. T.; Fellows Yates, J. A.; Field, J.; Haberle, S. G.; Jacob, E.; Johnson, C. N. et al.; Lindsey, E.; Lorenzen, E. D.; Louys, J.; Miller, G.; Mychajliw, A. M.; Slon, V.; Villavicencio, N. A.; Waters, M. R.; Welker, F.; Wood, R.; Petraglia, M. D.; Boivin, N. L.; Roberts, P.: Micro methods for megafauna: novel approaches to late quaternary extinctions and their contributions to faunal conservation in the anthropocene. Bioscience 69 (11), biz105, pp. 877 - 887 (2019)

Mann, A.; Sabin, S.; Ziesemer, K.; Vågene, Å. J.; Schroeder, H.; Ozga, A. T.; Sankaranarayanan, K.; Hofman, C. A.; Fellows Yates, J. A.; Salazar-García, D. C. et al.; Frohlich, B.; Aldenderfer, M.; Hoogland, M.; Read, C.; Milner, G. R.; Stone, A. C.; Lewis, C. M.; Krause, J.; Hofman, C.; Bos, K. I.; Warinner, C. G.: Differential preservation of endogenous human and microbial DNA in dental calculus and dentin. Scientific Reports 8 (1), 9822 (2018)

Fellows Yates, J. A.; Drucker, D. G.; Reiter, E.; Heumos, S.; Welker, F.; Münzel, S. C.; Wojtal, P.; Lázničková-Galetová, M.; Conard, N. J.; Herbig, A. et al.; Bocherens, H.; Krause, J.: Central European Woolly Mammoth population dynamics: Insights from Late Pleistocene Mitochondrial Genomes. Scientific Reports 7, 17714 (2017)

Warinner, C. G.; Herbig, A.; Mann, A.; Fellows Yates, J. A.; Weiß, C. L.; Burbano, H. A.; Orlando, L.; Krause, J.: A robust framework for microbial archaeology. Annual Review of Genomics and Human Genetics 18, pp. 321 - 356 (2017)

Fellows Yates, J. A.; Lamnidis, T. C.; Borry, M.; Andrades Valtueña, A.; Fagernäs, Z.; Clayton, S.; Garcia, M. U.; Neukamm, J.; Peltzer, A.: Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager. bioRxiv, 145615 (2020), 28 pp.