Publications of Johannes Krause

Journal Article (183)

141.
Journal Article
Lazaridis, I.; Patterson, N.; Mittnik, A.; Renaud , G.; Mallick, S.; Kirsanow, K.; Sudmant, P. H.; Schraiber, J. G.; Castellano, S.; Lipson, M. et al.; Berger, B.; Economou, C.; Bollongino, R.; Fu, Q.; Bos, K. I.; Nordenfelt, S.; Li, H.; De Filippo, C.; Pruefer, K.; Sawyer, S.; Posth, C.; Haak, W.; Hallgren, F.; Fornander, E.; Rohland, N.; Delsate, D.; Francken, M.; Guinet, J.-M.; Wahl, J.; Ayodo, G.; Babiker, H. A.; Bailliet, G.; Balanovska, E.; Balanovsky, O.; Barrantes, R.; Bedoya, G.; Ben-Ami, H.; Bene, J.; Berrada, F.; Bravi, C. M.; Brisighelli, F.; Busby, G. B. J.; Cali, F.; Churnosov, M.; Cole, D. E. C.; Corach, D.; Damba, L.; van Driem, G.; Dryomov, S.; Dugoujon, J.-M.; Fedorova, S. A.; Romero, I. G.; Gubina, M.; Hammer, M.; Henn, B. M.; Hervig, T.; Hodoglugil, U.; Jha, A. R.; Karachanak-Yankova, S.; Khusainova, R.; Khusnutdinova, E.; Kittles, R.; Kivisild, T.; Klitz, W.; Kucinskas, V.; Kushniarevich, A.; Laredj, L.; Litvinov, S.; Loukidis, T.; Mahley, R. W.; Melegh, B.; Metspalu, E.; Molina, J.; Mountain, J.; Nakkalajarvi, K.; Nesheva, D.; Nyambo, T.; Osipova, L.; Parik, J.; Platonov, F.; Posukh, O.; Romano, V.; Rothhammer, F.; Rudan, I.; Ruizbakiev, R.; Sahakyan, H.; Sajantila, A.; Salas, A.; Starikovskaya, E. B.; Tarekegn, A.; Toncheva, D.; Turdikulova, S.; Uktveryte, I.; Utevska, O.; Vasquez, R.; Villena, M.; Voevoda, M.; Winkler, C. A.; Yepiskoposyan, L.; Zalloua, P.; Zemunik, T.; Cooper, A.; Capelli, C.; Thomas, M. G.; Ruiz-Linares, A.; Tishkoff, S. A.; Singh, L.; Thangaraj, K.; Villems, R.; Comas, D.; Sukernik, R.; Metspalu, M.; Meyer, M.; Eichler, E. E.; Burger, J.; Slatkin, M.; Paeaebo, S.; Kelso, J.; Reich, D.; Krause, J.: Ancient human genomes suggest three ancestral populations for present-day Europeans. Nature 513 (7518), pp. 409 - 413 (2014)
142.
Journal Article
Schünemann, V. J.; Krause, J.: Wo der Mensch auf den Hund kam: Genetische Untersuchungen deuten darauf hin, dass der Ursprung der Domestikation in Europa liegt. Senckenberg: Natur, Forschung, Museum; das Senckenberg-Wissenschaftsmagazin 144 (7/8), pp. 278 - 281 (2014)
143.
Journal Article
Skoglund, P.; Northoff, B. H.; Shunkov, M. V.; Derevianko, A. P.; Paabo, S.; Krause, J.; Jakobsson, M.: Separating endogenous ancient DNA from modern day contamination in a Siberian Neandertal. Proceedings of the National Academy of Sciences of the United States of America 111 (6), pp. 2229 - 2234 (2014)
144.
Journal Article
Yoshida, K.; Burbano, H. A.; Krause, J.; Thines, M.; Weigel, D.; Kamoun, S.: Mining herbaria for plant pathogen genomes: Back to the future. PLoS Pathogens 10 (4), e1004028 (2014)
145.
Journal Article
Thalmann, O.; Shapiro, B.; Chi, P.; Schuenemann, V. J.; Sawyer, S.; Greenfield, D. L.; Germonpré, M. B.; Sablin, M. V.; López-Giráldez, F.; Domingo-Roura, X. et al.; Napierala, H.; Uerpmann, H.-P.; Loponte, D. M.; Acosta, A. A.; Giemsch, L.; Schmitz, R. W.; Worthington, B.; Buikstra, J. E.; Druzhkova, A.; Graphodatsky, A. S.; Ovodov, N. D.; Wahlberg, N.; Freedman, A. H.; Schweizer, R. M.; Koepfli, K.-P.; Leonard, J. A.; Meyer, M.; Krause, J.; Pääbo, S.; Green, R. E.; Wayne, R. K.: Complete mitochondrial genomes of ancient canids suggest a European origin of domestic dogs. Science 342 (6160), pp. 871 - 874 (2013)
146.
Journal Article
Schuenemann, V. J.; Singh, P.; Mendum, T. A.; Krause-Kyora, B.; Jaeger, G.; Bos, K.; Herbig, A.; Economou, C.; Benjak, A.; Busso, P. et al.; Nebel, A.; Boldsen, J. L.; Kjellstrom, A.; Wu, H.; Stewart, G. R.; Taylor, G. M.; Bauer, P.; Lee, O. Y. -.; Wu, H. H. T.; Minnikin, D. E.; Besra, G. S.; Tucker, K.; Roffey, S.; Sow, S. O.; Cole, S. T.; Nieselt, K.; Krause, J.: Genome-wide comparison of medieval and modern Mycobacterium leprae. Science 341 (6142), pp. 179 - 183 (2013)
147.
Journal Article
Guschanski, K.; Krause, J.; Sawyer, S.; Valente, L. M.; Bailey, S.; Finstermeier, K.; Sabin, R.; Gilissen, E.; Sonet, G.; Nagy, Z. T. et al.; Lenglet, G.; Mayer, F.; Savolainen, V.: Next-generation museomics disentangles one of the largest primate radiations. Systematic Biology 62 (4), pp. 539 - 554 (2013)
148.
Journal Article
Fu, Q.; Mittnik, A.; Johnson, P. L. F.; Bos, K. I.; Lari, M.; Bollongino, R.; Sun, C.; Giemsch, L.; Schmitz, R.; Burger, J. et al.; Ronchitelli, A. M.; Martini, F.; Cremonesi, R. G.; Svoboda, J.; Bauer, P.; Caramelli, D.; Castellano, S.; Reich, D.; Paeaebo, S.; Krause, J.: A revised timescale for human evolution based on ancient mitochondrial genomes. Current Biology 23 (7), pp. 553 - 559 (2013)
149.
Journal Article
Yoshida, K.; Schuenemann, V. J.; Cano, L. M.; Pais, M.; Mishra, B.; Sharma, R.; Lanz, C.; Martin, F. N.; Kamoun, S.; Krause, J. et al.; Thines, M.; Weigel, D.; Burbano, H. A.: The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine. eLife 2, e01108 (2013)
150.
Journal Article
Krause, J.: Human origins and the search for “Missing Links”. PLoS Biology 10 (5), e1001333 (2012)
151.
Journal Article
Sawyer, S.; Krause, J.; Guschanski, K.; Savolainen, V.; Päabo, S.: Temporal patterns of nucleotide misincorporations and DNA fragmentation in ancient DNA. PLoS One 7 (3), e34131 (2012)
152.
Journal Article
Fu, Q.; Rudan, P.; Paeaebo, S.; Krause, J.: Complete mitochondrial genomes reveal neolithic expansion into Europe. PLoS One 7 (3), e32473 (2012)
153.
Journal Article
Bos, K. I.; Stevens, P.; Nieselt, K.; Poinar, H. N.; DeWitte, S. N.; Krause, J.: Yersinia pestis: new evidence for an old infection. PLoS One 7 (11), e49803 (2012)
154.
Journal Article
Bos, K. I.; Schuenemann, V. J.; Golding, G. B.; Burbano, H. A.; Waglechner, N.; Coombes, B. K.; McPhee, J. B.; DeWitte, S. N.; Meyer, M.; Schmedes, S. et al.; Wood, J.; Earn, D. J. D.; Herring, D. A.; Bauer, P.; Poinar, H. N.; Krause, J.: A draft genome of Yersinia pestis from victims of the Black Death. Nature 478 (7370), pp. 506 - 510 (2011)
155.
Journal Article
Jordan, S.; Krause, J.; Prager, A.; Mitrovic, M.; Jonjic, S.; Koszinowski, U. H.; Adler, B.: Virus progeny of murine Cytomegalovirus bacterial artificial chromosome pSM3fr show reduced growth in salivary glands due to a fixed mutation of MCK-2. Journal of Virology 85 (19), pp. 10346 - 10353 (2011)
156.
Journal Article
Stoneking, M.; Krause, J.: Learning about human population history from ancient and modern genomes. Nature Reviews Genetics 12 (9), pp. 603 - 614 (2011)
157.
Journal Article
Schuenemann, V. J.; Bos, K. I.; DeWitte, S.; Schmedes, S.; Jamieson, J.; Mittnik, A.; Forrest, S.; Coombes, B. K.; Wood, J. W.; Earn, D. J. D. et al.; White, W.; Krause, J.; Poinar, H. N.: Targeted enrichment of ancient pathogens yielding the pPCP1 plasmid of Yersinia pestis from victims of the Black Death. Proceedings of the National Academy of Sciences of the United States of America 108 (38), pp. E746 - E752 (2011)
158.
Journal Article
Reich, D.; Green, R. E.; Kircher, M.; Krause, J.; Patterson, N.; Durand, E. Y.; Viola, B.; Briggs, A. W.; Stenzel, U.; Johnson, P. L. F. et al.; Maricic, T.; Good, J. M.; Marques-Bonet, T.; Alkan, C.; Fu, Q.; Mallick, S.; Li, H.; Meyer, M.; Eichler, E. E.; Stoneking, M.; Richards, M.; Talamo, S.; Shunkov, M. V.; Derevianko, A. P.; Hublin, J.-J.; Kelso, J.; Slatkin, M.; Pääbo, S.: Genetic history of an archaic hominin group from Denisova cave in Siberia. Nature 468 (7327), pp. 1053 - 1060 (2010)
159.
Journal Article
Krause, J.; Fu, Q.; Good, J. M.; Viola, B.; Shunkov, M. V.; Derevianko, A. P.; Pääbo, S.: The complete mitochondrial DNA genome of an unknown hominin from Southern Siberia. Nature 464 (7290), pp. 894 - 897 (2010)
160.
Journal Article
Briggs, A. W.; Stenzel, U.; Meyer, M.; Krause, J.; Kircher, M.; Pääbo, S.: Removal of deaminated cytosines and detection of in vivo methylation in ancient DNA. Nucleic Acids Research 38 (6), e87 (2010)
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