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Journal Article (36)

21.
Journal Article
Feldman, M.; Harbeck, M.; Keller, M.; Spyrou, M. A.; Rott, A.; Trautmann, B.; Scholz, H. C.; Päffgen, B.; Peters, J.; McCormick, M. et al.; Bos, K. I.; Herbig, A.; Krause, J.: A high-coverage Yersinia pestis genome from a 6th-century Justinianic plague victim. Molecular Biology and Evolution 33 (11), pp. 2911 - 2923 (2016)
22.
Journal Article
Immel, A.; Le Cabec, A.; Bonazzi, M.; Herbig, A.; Temming, H.; Schuenemann, V. J.; Bos, K. I.; Langbein, F.; Harvati, K.; Bridault, A. et al.; Pion, G.; Julien, M.-A.; Krotova, O.; Conard, N. J.; Münzel, S. C.; Drucker, D. G.; Viola, B.; Hublin, J.-J.; Tafforeau, P.; Krause, J.: Effect of X-ray irradiation on ancient DNA in sub-fossil bones: guidelines for safe X-ray imaging. Scientific Reports 6, 32969 (2016)
23.
Journal Article
Bos, K.; Herbig, A.; Sahl, J.; Waglechner, N.; Fourment, M.; Forrest, S. A.; Klunk, J.; Schuenemann, V. J.; Poinar, D.; Kuch, M. et al.; Golding, G. B.; Dutour, O.; Keim, P.; Wagner, D. M.; Holmes, E. C.; Krause, J.; Poinar, H. N.: Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus. eLife 5, e12994 (2016)
24.
Journal Article
Bos, K. I.; Jaeger, G.; Schuenemann, V. J.; Vågene, Å. J.; Spyrou, M. A.; Herbig, A.; Nieselt, K.; Krause, J.: Parallel detection of ancient pathogens via array-based DNA capture. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 370 (1660), 20130375 (2015)
25.
Journal Article
Harkins, K. M.; Buikstra, J. E.; Campbell, T.; Bos, K. I.; Johnson, E. D.; Krause, J.; Stone, A. C.: Screening ancient tuberculosis with qPCR: challenges and opportunities. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 370 (1660), 20130622 (2015)
26.
Journal Article
Devault, A. M.; Golding, G. B.; Waglechner, N.; Enk, J. M.; Kuch, M.; Tien, J. H.; Shi, M.; Fisman, D. N.; Dhody, A. N.; Forrest, S. et al.; Bos, K. I.; Earn, D. J. D.; Holmes, E. C.; Poinar, H. N.: Second-pandemic strain of Vibrio cholerae from the Philadelphia cholera outbreak of 1849. The New England Journal of Medicine: NEJM / Publ. by the Massachusetts Medical Society 370 (4), pp. 334 - 340 (2014)
27.
Journal Article
Bos, K. I.; Harkins, K. M.; Herbig, A.; Coscolla, M.; Weber, N.; Comas, I.; Forrest, S. A.; Bryant, J. M.; Harris, S. R.; Schuenemann, V. J. et al.; Campbell, T. J.; Majander, K.; Wilbur, A. K.; Guichon, R. A.; Steadman, D. L. W.; Cook, D. C.; Niemann, S.; Behr, M. A.; Zumarraga, M.; Bastida, R.; Huson, D.; Nieselt, K.; Young, D.; Parkhill, J.; Buikstra, J. E.; Gagneux, S.; Stone, A. C.; Krause, J.: Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis. Nature 514 (7523), pp. 494 - 497 (2014)
28.
Journal Article
Schuenemann, V. J.; Singh, P.; Mendum, T. A.; Krause-Kyora, B.; Jaeger, G.; Bos, K.; Herbig, A.; Economou, C.; Benjak, A.; Busso, P. et al.; Nebel, A.; Boldsen, J. L.; Kjellstrom, A.; Wu, H.; Stewart, G. R.; Taylor, G. M.; Bauer, P.; Lee, O. Y. -.; Wu, H. H. T.; Minnikin, D. E.; Besra, G. S.; Tucker, K.; Roffey, S.; Sow, S. O.; Cole, S. T.; Nieselt, K.; Krause, J.: Genome-wide comparison of medieval and modern Mycobacterium leprae. Science 341 (6142), pp. 179 - 183 (2013)
29.
Journal Article
Fu, Q.; Mittnik, A.; Johnson, P. L. F.; Bos, K. I.; Lari, M.; Bollongino, R.; Sun, C.; Giemsch, L.; Schmitz, R.; Burger, J. et al.; Ronchitelli, A. M.; Martini, F.; Cremonesi, R. G.; Svoboda, J.; Bauer, P.; Caramelli, D.; Castellano, S.; Reich, D.; Paeaebo, S.; Krause, J.: A revised timescale for human evolution based on ancient mitochondrial genomes. Current Biology 23 (7), pp. 553 - 559 (2013)
30.
Journal Article
Bos, K. I.; Stevens, P.; Nieselt, K.; Poinar, H. N.; DeWitte, S. N.; Krause, J.: Yersinia pestis: new evidence for an old infection. PLoS One 7 (11), e49803 (2012)
31.
Journal Article
Bos, K. I.; Schuenemann, V. J.; Golding, G. B.; Burbano, H. A.; Waglechner, N.; Coombes, B. K.; McPhee, J. B.; DeWitte, S. N.; Meyer, M.; Schmedes, S. et al.; Wood, J.; Earn, D. J. D.; Herring, D. A.; Bauer, P.; Poinar, H. N.; Krause, J.: A draft genome of Yersinia pestis from victims of the Black Death. Nature 478 (7370), pp. 506 - 510 (2011)
32.
Journal Article
Schuenemann, V. J.; Bos, K. I.; DeWitte, S.; Schmedes, S.; Jamieson, J.; Mittnik, A.; Forrest, S.; Coombes, B. K.; Wood, J. W.; Earn, D. J. D. et al.; White, W.; Krause, J.; Poinar, H. N.: Targeted enrichment of ancient pathogens yielding the pPCP1 plasmid of Yersinia pestis from victims of the Black Death. Proceedings of the National Academy of Sciences of the United States of America 108 (38), pp. E746 - E752 (2011)
33.
Journal Article
Okello, J. B. A.; Rodriguez, L.; Poinar, D.; Bos, K.; Okwi, A. L.; Bimenya, G. S.; Sewankambo, N. K.; Henry, K. R.; Kuch, M.; Poinar, H. N.: Quantitative assessment of the sensitivity of various commercial reverse transcriptases based on armored HIV RNA. PLoS One 5 (11), e13931 (2010)
34.
Journal Article
Rutledge, L. Y.; Bos, K. I.; Pearce, R. J.; White, B. N.: Genetic and morphometric analysis of sixteenth century Canis skull fragments: implications for historic eastern and gray wolf distribution in North America. Conservation Genetics Resources 11 (4), pp. 1273 - 1281 (2010)
35.
Journal Article
Poinar, H.; Fiedel, S.; King, C. E.; Devault, A. M.; Bos, K.; Kuch, M.; Debruyne, R.: Comment on "DNA from pre-Clovis human coprolites in Oregon, North America". Science 325 (5937), 148-a (2009)
36.
Journal Article
Debruyne, R.; Chu, G.; King, C. E.; Bos, K.; Kuch, M.; Schwarz, C.; Szpak, P.; Groecke, D. R.; Matheus, P.; Zazula, G. et al.; Guthrie, D.; Froese, D.; Buigues, B.; de Marliave, C.; Flemming, C.; Poinar, D.; Fisher, D.; Southon, J.; Tikhonov, A. N.; MacPhee, R. D. E.; Poinar, H. N.: Out of America: Ancient DNA evidence for a new world origin of late quaternary woolly mammoths. Current Biology 18 (17), pp. 1320 - 1326 (2008)

Book Chapter (1)

37.
Book Chapter
Vågene, Å. J.; Krause, J.; Bos, K. I.: Metagenomic analysis and mitochondrial genome reconstruction of the post-medieval individual from Moneen Cave. In: Archaeological excavations in Moneen Cave, the Burren, Co. Clare, pp. 49 - 52 (Ed. Dowd, M.). Archaeopress, Oxford (2016)

Poster (1)

38.
Poster
Honap, T. P.; Vågene, Å. J.; Herbig, A.; Buikstra, J. E.; Bos, K. I.; Krause, J.; Stone, A. C.: Genomic analyses of ancient Mycobacterium tuberculosis complex strains from the Americas. (2017)

Working Paper (2)

39.
Working Paper
Knauf, S.; Gogarten, J.; Schuenemann, V. J.; Nys, H. M. D.; Duex, A.; Strouhal, M.; Mikalova, L.; Bos, K. I.; Armstrong, R.; Batamuzi, E. K. et al.; Chuma, I. S.; Davoust, B.; Diatta, G.; Fyumagwa, R. D.; Kazwala, R. R.; Keyyu, J. D.; Lejora, I. A. V.; Levasseur, A.; Liu, H.; Mayhew, M. A.; Mediannikov, O.; Raoult, D.; Wittig, R. M.; Roos, C.; Leendertz, F. H.; Smajs, D.; Nieselt, K.; Krause, J.; Calvignac-Spencer, S.: African nonhuman primates are infected with the Yaws bacterium Treponema pallidum subsp. pertenue. bioRxiv, 135491 (2017), 9 pp.
40.
Working Paper
Herbig, A.; Maixner, F.; Bos, K. I.; Zink, A.; Krause, J.; Huson, D. H.: MALT: Fast alignment and analysis of metagenomic DNA sequence data applied to the Tyrolean Iceman. bioRxiv, 050559 (2017), 16 pp.
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