Max Planck Institute for the Science of Human History

James A. Fellows Yates, B.Sc., M.Sc.

Kahlaische Strasse 10

07745 Jena



James A. Fellows Yates, B.Sc., M.Sc.

James A. Fellows Yates, B.Sc., M.Sc.
James A. Fellows Yates, B.Sc., M.Sc.
Department of Archaeogenetics

Phone: +49 3641 686-629

Main Focus

My current area of research is centered on the ancient DNA content of fossilised dental plaque, also known as dental calculus. This work is a part of the DAG's "Evolution and Ecology of the Human Oral Microbiome" project, which contains samples spanning from the Palaeolithic to Modern day. I am primarily exploring how we can analyse and authenticate the complex genetic makeup of this material through shotgun metagenomics.

Previously, I have worked on Late Pleistocene woolly mammoth mitochondrial genomes, as well as testing collagen ‘fingerprinting’ methods (ZooMS) on burnt skeletal remains.

My general interests are:
  • Biomolecular archaeology (Ancient DNA, Palaeoproteomics, Stable Isotopes)
  • Prehistory
  • Oral Microbiomes
  • Bacterial genomics
  • Metagenomics

Curriculum Vitae

My CV can be downloaded here


Velsko, I. M., Fellows Yates, J. A., Aron, F., Hagan, R. W., Frantz, L. A. F., Loe, L., … Warinner, C. (2019). Microbial differences between dental plaque and historic dental calculus are related to oral biofilm maturation stage. Microbiome, 7(1), 102.

Mann, A. E., Sabin, S., Ziesemer, K., Vågene, Å. J., Schroeder, H., Ozga, A. T., Sankaranarayanan, K., Hofman, C. A.; Fellows Yates, J. A ,… Warinner, C. (2018). Differential preservation of endogenous human and microbial DNA in dental calculus and dentin. Scientific Reports8(1), 9822.

Warinner, C., Herbig, A., Mann, A., Fellows Yates, J. A., Weiß, C. L., Burbano, H. A., … Krause, J. (2017). A Robust Framework for Microbial Archaeology. Annual Review of Genomics and Human Genetics, 18, 321–356.

Fellows Yates, J. A., Drucker, D. G., Reiter, E., Heumos, S., Welker, F., Münzel, S. C., … Krause, J. (2017). Central European Woolly Mammoth Population Dynamics: Insights from Late Pleistocene Mitochondrial Genomes. Scientific Reports7(1), 17714.

Conferences and Workshops

Fellows Yates. J.A. et al. "Reconstruction of Oral Microbiomes from Extinct and Extant Anthropoids through ancient DNA" Conference presentation, International Symposium for Biomolecular Archaeology (ISBA8), September 2018, Jena, Germany

Fellows Yates, J.A. et al. "Palaeogenomic Investigation Of 50,000 Years Of The Human Oral Microbiome In The Iberian Mediterranean" Conference presentation, Annual Meeting of the European Association for Archaeologists (EAA 2018), September 2018, Barcelona, Spain 

Fellows Yates. J.A.; et al. "Reconstruction of Oral Microbiomes from Extinct and Extant Anthropoids through ancient DNA" Conference poster Society for Molecular Biology and Evolution (SMBE18), July 2018, Yokohama, Japan

Fellows Yates et al. (2017) "Central European Late Pleistocene Woolly Mammoths: Insights from ZooMS, Stable Isotope and aDNA data" Workshop presentation, Megafauna and Methods Workshop, Max Planck Institute for the Science of Human History, Jena, Germany

Fellows Yates et al. (2016) "Full Mitochondrial Genomes of Central European Upper Palaeolithic Woolly Mammoths (Mammuthus primigenius)" Conference Poster, International Symposium for Biomolecular Archaeology (ISBA7), University of Oxford, Oxford, United Kingdom


2015 - Current Ph.D. Archaeogenetics, MPI for the Science of Human History, Jena

  • Thesis (Provisional): Evolution of the Oral Microbiome

2013-2015 M.Sc. Naturwissenschaftliches Archäologie / Archaeological Sciences, Universität Tübingen (DE)

  • Thesis: Full Mitochondrial Genomes of Upper Palaeolithic Central EUropean Woolly Mammoths (Mammuthus primigenius)

2010-2013       B.Sc. Bioarchaeology, University of York (UK)

  • Thesis: “It Will Not Be Possible To Use Zooarchaeology By Mass Spectrometry (ZooMS) To Identify Species In Samples Of Cremated Bone That Have Been Burnt Higher Than 155oC”


2014-2015 Stable Isotopes Student Research Assistant - Universität Tübingen

  • AG Biogeologie - sample preparation, collagen extraction, data curation

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