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Archaeogenetics
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Director J. Krause
- Publications
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Journal Article
Flegontov, P.; Altınışık, N. E.; Changmai, P.; Rohland, N.; Mallick, S.; Adamski, N.; Bolnick, D. A.; Broomandkhoshbacht, N.; Candilio, F.; Culleton, B. J. et al.; Flegontova, O.; Friesen, T. M.; Jeong, C.; Harper, T. K.; Keating, D.; Kennett, D. J.; Kim, A. M.; Lamnidis, T. C.; Lawson, A. M.; Olalde, I.; Oppenheimer, J.; Potter, B. A.; Raff, J.; Sattler, R. A.; Skoglund, P.; Stewardson, K.; Vajda, E. J.; Vasilyev, S.; Veselovskaya, E.; O’Rourke, M. G. H. D. H.; Krause, J.; Pinhasi, R.; Schiffels, S.: Palaeo-Eskimo genetic ancestry and the peopling of Chukotka and North America. Nature (2019)
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Journal Article
Villalba-Mouco, V.; Loosdrecht, M. S. v. d.; Posth, C.; Mora, R.; Martínez-Moreno, J.; Rojo-Guerra, M.; Salazar-García, D. C.; Royo-Guillén, J. I.; Kunst, M.; Rougier, H. et al.; Crevecoeur, I.; Arcusa-Magallón, H.; Tejedor-Rodríguez, C.; de Lagrán, I. G.-M.; Garrido-Pena, R.; Alt, K. W.; Jeong, C.; Schiffels, S.; Utrilla, P.; Krause, J.; Haak, W.: Survival of Late Pleistocene Hunter-Gatherer ancestry in the Iberian Peninsula. Current Biology
29 (7), pp. 1169 - 1177 (2019)
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Journal Article
Wißing, C.; Rougier, H.; Baumann, C.; Comeyne, A.; Crevecoeur, I.; Drucker, D. G.; Gaudzinski-Windheuser, S.; Germonpré, M.; Gómez-Olivencia, A.; Krause, J. et al.; Matthies, T.; Naito, Y. I.; Posth, C.; Semal, P.; Street, M.; Bocherens, H.: Stable isotopes reveal patterns of diet and mobility in the last Neandertals and first modern humans in Europe. Scientific Reports
9 (2019)
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Journal Article
Wang, C.-C.; Reinhold, S.; Kalmykov, A.; Wissgott, A.; Brandt, G.; Jeong, C.; Cheronet, O.; Ferry, M.; Harney, E.; Keating, D. et al.; Mallick, S.; Rohland, N.; Stewardson, K.; Kantorovich, A. R.; Maslov, V. E.; Petrenko, V. G.; Erlikh, V. R.; Atabiev, B. C.; Magomedov, R. G.; Kohl, P. L.; Alt, K. W.; Pichler, S. L.; Gerling, C.; Meller, H.; Vardanyan, B.; Yeganyan, L.; Rezepkin, A. D.; Mariaschk, D.; Berezina, N.; Gresky, J.; Fuchs, K.; Knipper, C.; Schiffels, S.; Balanovska, E.; Balanovsky, O.; Mathieson, I.; Higham, T.; Berezin, Y. B.; Buzhilova, A.; Trifonov, V.; Pinhasi, R.; Belinskij, A. B.; Reich, D.; Hansen, S.; Krause, J.; Haak, W.: Ancient human genome-wide data from a 3000-year interval in the Caucasus corresponds with eco-geographic regions. Nature Communications
10 (1) (2019)
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Journal Article
Jeong, C.; Balanovsky, O.; Lukianova, E.; Kahbatkyzy, N.; Flegontov, P.; Zaporozhchenko, V.; Immel, A.; Wang, C.-C.; Ixan, O.; Khussainova, E. et al.; Bekmanov, B.; Zaibert, V.; Lavryashina, M.; Pocheshkhova, E.; Yusupov, Y.; Agdzhoyan, A.; Koshel, S.; Bukin, A.; Nymadawa, P.; Turdikulova, S.; Dalimova, D.; Churnosov, M.; Skhalyakho, R.; Daragan, D.; Bogunov, Y.; Bogunova, A.; Shtrunov, A.; Dubova, N.; Zhabagin, M.; Yepiskoposyan, L.; Churakov, V.; Pislegin, N.; Damba, L.; Saroyants, L.; Dibirova, K.; Atramentova, L.; Utevska, O.; Idrisov, E.; Kamenshchikova, E.; Evseeva, I.; Metspalu, M.; Outram, A. K.; Robbeets, M.; Djansugurova, L.; Balanovska, E.; Schiffels, S.; Haak, W.; Reich, D.; Krause, J.: The genetic history of admixture across inner Eurasia. Nature Ecology and Evolution (2019)
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Journal Article
Lamnidis, T. C.; Majander, K.; Jeong, C.; Salmela, E.; Wessman, A.; Moiseyev, V.; Khartanovich, V.; Balanovsky, O.; Ongyerth, M.; Weihmann, A. et al.; Sajantila, A.; Kelso, J.; Pääbo, S.; Onkamo, P.; Haak, W.; Krause, J.; Schiffels, S.: Ancient Fennoscandian genomes reveal origin and spread of Siberian ancestry in Europe. Nature Communications
9 (2018)
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Journal Article
Jeong, C.; Wilkin, S.; Amgalantugs, T.; Bouwman, A. S.; Taylor, W. T. T.; Hagan, R.; Bromage, S.; Tsolmon, S.; Trachsel, C.; Grossmann, J. et al.; Littleton, J.; Makarewicz, C. A.; Krigbaum, J.; Burri Promerová, M.; Scott, A.; Davaasambuu, G.; Wright, J.; Irmer, F.; Myagmar, E.; Boivin, N. L.; Robbeets, M.; Rühli, F. J.; Krause, J.; Frohlich, B.; Hendy, J.; Warinner, C. G.: Bronze Age population dynamics and the rise of dairy pastoralism on the eastern Eurasian steppe. Proceedings of the National Academy of Sciences of the United States of America
115 (48) (2018)
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Journal Article
Posth, C.; Nakatsuka, N.; Lazaridis, I.; Skoglund, P.; Mallick, S.; Lamnidis, T. C.; Rohland, N.; Nägele, K.; Adamski, N.; Bertolini, E. et al.; Broomandkhoshbacht, N.; Cooper, A.; Culleton, B. J.; Ferraz da Silva, T.; Ferry, M.; Furtwängler, A.; Haak, W.; Harkins, K.; Harper, T. K.; Hünemeier, T.; Lawson, A. M.; Llamas, B.; Michel, M.; Nelson, E. A.; Oppenheimer, J.; Patterson, N.; Schiffels, S.; Sedig, J.; Stewardson, K.; Talamo, S.; Wang, C.-C.; Hublin, J.-J.; Hubbe, M.; Harvati, K.; Delaunay, A. N.; Beier, J.; Francken, M.; Kaulicke, P.; Reyes-Centeno, H.; Rademaker, K.; Trask, W. R.; Robinson, M.; Gutierrez, S. M.; Prufer, K. M.; Salazar-García, D. C.; Chim, E. N.; Gomes, L. M. P.; Alves, M. L.; Liryo, A.; Inglez, M.; Oliveira, R. E.; Bernardo, D. V.; Barioni, A.; Wesolowski, V.; Scheifler, N. A.; Rivera, M. A.; Plens, C. R.; Messineo, P. G.; Figuti, L.; Corach, D.; Scabuzzo, C.; Eggers, S.; DeBlasis, P.; Reindel, M.; Méndez, C.; Politis, G.; Tomasto-Cagigao, E.; Kennett, D. J.; Strauss, A.; Fehren-Schmitz, L.; Krause, J.; Reich, D.: Reconstructing the deep population history of Central and South America. Cell
175 (5), e22, pp. 1185 - 1197 (2018)
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Journal Article
Furtwängler, A.; Reiter, E.; Neumann, G. U.; Siebke, I.; Steuri, N.; Hafner, A.; Lösch, S.; Anthes, N.; Schuenemann, V. J.; Krause, J.: Ratio of mitochondrial to nuclear DNA affects contamination estimates in ancient DNA analysis. Scientific Reports
8 (2018)
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Journal Article
Knauf, S.; Gogarten, J. F.; Schuenemann, V. J.; Nys, D.; M., H.; Düx, A.; Strouhal, M.; Mikalová, L.; Bos, K. I.; Armstrong, R. et al.; Batamuzi, E. K.; Chuma, I. S.; Davoust, B.; Diatta, G.; Fyumagwa, R. D.; Kazwala, R. R.; Keyyu, J. D.; Lejora, I. A. V.; Levasseur, A.; Liu, H.; Mayhew, M. A.; Mediannikov, O.; Raoult, D.; Wittig, R. M.; Roos, C.; Leendertz, F. H.; Šmajs, D.; Nieselt, K.; Krause, J.; Calvignac-Spencer, S.: Nonhuman primates across sub-Saharan Africa are infected with the yaws bacterium Treponema pallidum subsp. pertenue. Emerging Microbes & Infections
7 (2018)
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Journal Article
Amorim, C. E. G.; Vai, S.; Posth, C.; Modi, A.; Koncz, I.; Hakenbeck, S.; La Rocca, M. C.; Cristina, M.; Mende, B.; Bobo, D. et al.; Pohl, W.; Baricco, L. P.; Bedini, E.; Francalacci, P.; Giostra, C.; Vida, T.; Winger, D.; von Freeden, U.; Ghirotto, S.; Lari, M.; Barbujani, G.; Krause, J.; Caramelli, D.; Geary, P. J.; Veeramah, K. R.: Understanding 6th-century barbarian social organization and migration through paleogenomics. Communications Physics
9 (2018)
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Journal Article
O’Sullivan, N.; Posth, C.; Coia, V.; Schuenemann, V. J.; Price, T. D.; Wahl, J.; Pinhasi, R.; Zink, A.; Krause, J.; Maixner, F.: Ancient genome-wide analyses infer kinship structure in an Early Medieval Alemannic graveyard. Science Advances
4 (9) (2018)
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Journal Article
Galarza, J. M.; Barquera, R.; Álvarez, A. M. T.; Zaragoza, H.; I., D.; Sevilla, G. P.; Tamayo, A.; Pérez, M.; Dávila, D.; Birnberg, L. et al.; Alonzo, V. A.; Krause, J.; Grijalva, M.: Genetic diversity of the HLA system in human populations from the Sierra (Andean), Oriente (Amazonian) and Costa (Coastal) regions of Ecuador. Human Immunology
79 (9), pp. 639 - 650 (2018)
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Journal Article
Eisenmann, S.; Bánffy, E.; van Dommelen, P.; Hofmann, K. P.; Maran, J.; Lazaridis, I.; Mittnik, A.; McCormick, M.; Krause, J.; Reich, D. et al.; Stockhammer, P. W.: Reconciling material cultures in archaeology with genetic data: The nomenclature of clusters emerging from archaeogenomic analysis. Scientific Reports
8 (2018)
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Journal Article
Mann, A.; Sabin, S.; Ziesemer, K.; Vågene, Å. J.; Schroeder, H.; Ozga, A. T.; Sankaranarayanan, K.; Hofman, C. A.; Fellows Yates, J. A.; Salazar-García, D. C. et al.; Frohlich, B.; Aldenderfer, M.; Hoogland, M.; Read, C.; Milner, G. R.; Stone, A. C.; Lewis, C. M.; Krause, J.; Hofman, C.; Bos, K. I.; Warinner, C. G.: Differential preservation of endogenous human and microbial DNA in dental calculus and dentin. Scientific Reports
8 (1) (2018)
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Journal Article
Schuenemann, V. J.; Lankapalli, A. K.; Barquera, R.; Nelson, E. A.; Iraíz Hernández, D.; Acuña Alonzo, V.; Bos, K. I.; Márquez Morfín, L.; Herbig, A.; Krause, J.: Historic Treponema pallidum genomes from Colonial Mexico retrieved from archaeological remains. PLOS Neglected Tropical Diseases
12 (6) (2018)
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Journal Article
Spyrou, M. A.; Tukhbatova, R. I.; Wang, C.-C.; Andrades Valtueña, A.; Lankapalli, A. K.; Kondrashin, V. V.; Tsybin, V. A.; Khokhlov, A.; Kühnert, D.; Herbig, A. et al.; Bos, K. I.; Krause, J.: Analysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plague. Nature Communications
9 (2018)
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Journal Article
Schuenemann, V. J.; Avanzi, C.; Krause-Kyora, B.; Seitz, A.; Herbig, A.; Inskip, S.; Bonazzi, M.; Reiter, E.; Urban, C.; Dangvard Pedersen, D. et al.; Taylor, G. M.; Singh, P.; Stewart, G. R.; Velemínský, P.; Likovsky, J.; Marcsik, A.; Molnár, E.; Pálfi, G.; Mariotti, V.; Riga, A.; Belcastro, M. G.; Boldsen, J. L.; Nebel, A.; Mays, S.; Donoghue, H. D.; Zakrzewski, S.; Benjak, A.; Nieselt, K.; Cole, S. T.; Krause, J.: Ancient genomes reveal a high diversity of Mycobacterium leprae in medieval Europe. PLoS Pathogens
14 (5), pp. 1 - 17 (2018)
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