Publications A. Herbig
Journal Article (48)
1.
Journal Article
69 (6), pp. 455 - 459 (2020)
Comparison of target enrichment strategies for ancient pathogen DNA. Biotechniques 2.
Journal Article
18 (1), 108 (2020)
2000-year-old pathogen genomes reconstructed from metagenomic analysis of Egyptian mummified individuals. BMC Biology 3.
Journal Article
10 (1), 9499 (2020)
A treponemal genome from an historic plague victim supports a recent emergence of yaws and its presence in 15th century Europe. Scientific Reports 4.
Journal Article
30 (11), 2020.04.002, pp. 2078 - 2091.e11 (2020)
Origin and health status of first-generation Africans from early colonial Mexico. Current Biology 5.
Journal Article
CoproID predicts the source of coprolites and paleofeces using microbiome composition and host DNA content. PeerJ, 8:e9001 (2020)
6.
Journal Article
4 (3), pp. 324 - 333 (2020)
Emergence of human-adapted Salmonella enterica is linked to the Neolithization process. Nature Ecology & Evolution 7.
Journal Article
Advances in the molecular detection of tuberculosis in pre-contact Andean South America. International Journey of Paleopathology, 2019.12.006 (2020)
8.
Journal Article
20 (n/a), 280 (2019) (2019)
HOPS: Automated detection and authentication of pathogen DNA in archaeological remains. Genome Biology 9.
Journal Article
10 (1), 4470 (2019)
Phylogeography of the second plague pandemic revealed through analysis of historical Yersinia pestis genomes. Nature Communications 10.
Journal Article
73 (1), pp. 639 - 666 (2019)
Paleomicrobiology: Diagnosis and Evolution of Ancient Pathogens. Annual Review of Microbiology 11.
Journal Article
116 (25), pp. 12363 - 12372 (2019)
Ancient Yersinia pestis genomes from across Western Europe reveal early diversification during the First Pandemic (541–750). Proceedings of the National Academy of Sciences of the United States of America 12.
Journal Article
21, 201 (2020) (2019)
A seventeenth-century Mycobacterium tuberculosis genome supports a Neolithic emergence of the Mycobacterium tuberculosis complex. Genome Biology: Biology for the Post-Genomic Era 13.
Journal Article
20, pp. 323 - 340 (2019)
Ancient pathogen genomics as an emerging tool for infectious disease research. Nature Reviews Genetics 14.
Journal Article
3 (4), e00080-18 (2018)
Selection of Appropriate Metagenome Taxonomic Classifiers for Ancient Microbiome Research. mSystems 15.
Journal Article
12 (6), e0006447 (2018)
Historic Treponema pallidum genomes from Colonial Mexico retrieved from archaeological remains. PLOS Neglected Tropical Diseases 16.
Journal Article
9, 2234 (2018)
Analysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plague. Nature Communications 17.
Journal Article
14 (5), pp. 1 - 17 (2018)
Ancient genomes reveal a high diversity of Mycobacterium leprae in medieval Europe. PLoS Pathogens 18.
Journal Article
7, e36666 (2018)
Neolithic and medieval virus genomes reveal complex evolution of Hepatitis B. eLife 19.
Journal Article
2 (3), pp. 520 - 528 (2018)
Salmonella enterica genomes from victims of a major sixteenth-century epidemic in Mexico. Nature Ecology & Evolution 20.
Journal Article
14 (5), e1006997 (2018)
Ancient genomes reveal a high diversity of Mycobacterium leprae in medieval Europe. PLoS Pathogens